Tools
RICElect
Genomic prediction platform
for 96 rice traits across 599 Thai accessions
BLAST tool
NCBI BLAST
(Basic Local Alignment Search Tool)
on reference sequences
riceExplorer & haploAnnotator
Identifying haplotypes and potential diversity sources
https://doi.org/10.3389/fpls.2022.781153
GWAS analysis
Running GWAS analysis with your own phenotype data
Primer design
Retrieving sequence data for designing primer in various format such as KASP, MassArray, and BatchPrimer3
Population structure analysis
Providing tools for population analysis such as structure, PCA, phylogenetic tree, LD decay, etc.